Pics are wonderful for showing that something can be done, but they're misleading on a project like this because if they're taken close up enough to show detail it's difficult to figure out location. Then if wide enough to show location, detail is tough. You just end up poking around the car anyway so start there. I know that sounds like a blow-off, but, IMO, it really is the easiest, fastest way of making progress.
When the original pics first appeared It turned out to be easier, for me at least, to just go out to the car and start poking around once I knew what could be done. There are many areas around the windows and doors, front and rear, where there are spaces just waiting to be filled with this foam rope to close up areas of air infiltration. The rope is cheap, removable and easy to experiment with.
Look for spaces behind weatherstrip around doors, inside and outside of the windows. Look down at the window channels when the windows are open. There are spaces inside and outside the window glass that will accept the foam rope. Test the windows to make sure you haven't added any obstruction that will slow operation and expose the window motor to possible premature wear.
One other problem is the fact that we're fighting a whole bunch of different causes, sources and locations of these noises and YMMV so there is no one-size-fits-all fix. Ya just gotta experiment. Good luck and, hopefully, have fun.